BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039F05SP1|AL430731
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1057 1803 0.0
>3x_Contig1057
Length = 3069
Score = 1803 bits (909), Expect = 0.0
Identities = 917/919 (99%), Gaps = 1/919 (0%)
Strand = Plus / Plus
Query: 1 gatcctagtgcctcggcagcttcgtgtctgaccattggggcttcttccggacgtgccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1744 gatcctagtgcctcggcagcttcgtgtctgaccattggggcttcttccggacgtgccaaa 1803
Query: 61 acttccttgagatgaggtaccaccactgggttacagatttgaccaaacacatatgcgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1804 acttccttgagatgaggtaccaccactgggttacagatttgaccaaacacatatgcgatt 1863
Query: 121 tcgtgcttgaaaagagcagatgggtcatcgaacccagatgccaatgctaaacatgcctcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1864 tcgtgcttgaaaagagcagatgggtcatcgaacccagatgccaatgctaaacatgcctcg 1923
Query: 181 tcgttaccgatgtctctcaaacggaacatggctctgtaacgctcgaacaacgggcggttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1924 tcgttaccgatgtctctcaaacggaacatggctctgtaacgctcgaacaacgggcggttt 1983
Query: 241 tgatcgttcaaaatatctttcaactcttggatcttgtagtctttctccagggaaaatggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1984 tgatcgttcaaaatatctttcaactcttggatcttgtagtctttctccagggaaaatggt 2043
Query: 301 ggcgctgggtcgatagaagagtacaaagattcttgtaaagcctctcttctgccttcttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2044 ggcgctgggtcgatagaagagtacaaagattcttgtaaagcctctcttctgccttcttca 2103
Query: 361 ctggtttcccacttgattctatcaatggcaagctcacacgtttgtctgatctccaacagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2104 ctggtttcccacttgattctatcaatggcaagctcacacgtttgtctgatctccaacagt 2163
Query: 421 gggtcttctttgaaatatttttctaggatatccaacgagtcaacatcgttcaaagcaccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2164 gggtcttctttgaaatatttttctaggatatccaacgagtcaacatcgttcaaagcaccc 2223
Query: 481 aatgcctcggctgcctcgtgtcttaccatacactgttgtttgtcatcagcaagcacatcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2224 aatgcctcggctgcctcgtgtcttaccatacactgttgtttgtcatcagcaagcacatcc 2283
Query: 541 ctgagcaatggagcaccggccatgtttttcgtttgacctaacacgtatgcgacctcatgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2284 ctgagcaatggagcaccggccatgtttttcgtttgacctaacacgtatgcgacctcatgc 2343
Query: 601 ttcaacaattcactttcgtccccgaacgcttctgcgaggtactgagtagcctttaaagca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2344 ttcaacaattcactttcgtccccgaacgcttctgcgaggtactgagtagcctttaaagca 2403
Query: 661 tcctctggtttcgaggcaaattcctcggcatgacccttcaagttgaataaagctctgaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2404 tcctctggtttcgaggcaaattcctcggcatgacccttcaagttgaataaagctctgaac 2463
Query: 721 ctgtttgccaaaggagctttaccagaattgtttaccaagatgtctctcaactgttccaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2464 ctgtttgccaaaggagctttaccagaattgtttaccaagatgtctctcaactgttccaaa 2523
Query: 781 gaacagttgtcgacatcgacctcgaaatgtttctcgaaattagtagacatggatgactta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2524 gaacagttgtcgacatcgacctcgaaatgtttctcgaaattagtagacatggatgactta 2583
Query: 841 atctcttcgtttcacctgggacctagctgaacaccgtgaagtttggaactaaatacgact 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2584 atctcttcgtttcacctgggacctagctgaacaccgtgaagtttggaactaaatacgact 2643
Query: 901 aaaa-macagatttaaggc 918
|||| |||||||||||||
Sbjct: 2644 aaaacaacagatttaaggc 2662
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5731
Number of Sequences: 1807
Number of extensions: 5731
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)